Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA9Q9Y5G4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA9Q9Y5G4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 AC104109.2-201ENST00000602919 1418 ntBASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 SART3-203ENST00000546611 1184 ntBASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA9Q9Y5G4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 OR7E14P-202ENST00000530490 1290 ntBASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA9Q9Y5G4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 MED15P5-201ENST00000423150 992 ntBASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 AC005104.2-201ENST00000427818 678 ntBASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 RPS2P1-201ENST00000434010 821 ntBASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 LINC00602-201ENST00000629776 2065 ntBASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms