Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 AL592071.1-201ENST00000611956 408 ntBASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 AC100803.2-201ENST00000562459 1963 ntBASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 AC067852.2-201ENST00000590513 2313 ntBASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AL590627.1-203ENST00000421194 1026 ntBASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 IGHV3-47-201ENST00000425060 335 ntBASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB1Q9Y5F3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 BX640515.1-201ENST00000617215 977 ntBASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 AC124864.1-201ENST00000623408 392 ntBASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB1Q9Y5F3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 AC012317.2-201ENST00000623305 2251 ntBASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 NUS1P2-201ENST00000417358 873 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms