Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 AL355075.4-201ENST00000554988 638 ntBASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 NEK4P2-201ENST00000580004 1012 ntBASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MRPS28Q9Y2Q9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 KRT17P2-201ENST00000300992 1314 ntBASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 NKILA-202ENST00000614771 2598 ntBASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MRPS28Q9Y2Q9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 REXO1L11P-201ENST00000620964 1927 ntBASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 DDX43P3-201ENST00000441064 443 ntBASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AC113404.2-201ENST00000507884 177 ntBASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 AL157888.1-201ENST00000631930 593 ntBASIC15.27■□□□□ 0.04
MRPS28Q9Y2Q9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms