Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.07■□□□□ 0.8
FBXO40Q9UH90 AC092183.1-201ENST00000469884 875 ntBASIC20.07■□□□□ 0.8
FBXO40Q9UH90 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 AC010327.4-202ENST00000591484 748 ntBASIC20.07■□□□□ 0.8
FBXO40Q9UH90 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 AL691403.2-201ENST00000618460 490 ntBASIC20.07■□□□□ 0.8
FBXO40Q9UH90 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.06■□□□□ 0.8
FBXO40Q9UH90 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 AL138781.2-201ENST00000617896 1843 ntBASIC20.05■□□□□ 0.8
FBXO40Q9UH90 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 CRYGEP-201ENST00000412192 528 ntBASIC20.05■□□□□ 0.8
FBXO40Q9UH90 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 RPS15P9-201ENST00000494093 319 ntBASIC20.05■□□□□ 0.8
FBXO40Q9UH90 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 MTDHP5-201ENST00000598980 586 ntBASIC20.05■□□□□ 0.8
FBXO40Q9UH90 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 AC008667.4-201ENST00000607370 168 ntBASIC20.05■□□□□ 0.8
FBXO40Q9UH90 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
FBXO40Q9UH90 AC009336.1-201ENST00000608941 1553 ntBASIC20.04■□□□□ 0.8
FBXO40Q9UH90 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 AC112482.1-201ENST00000492080 688 ntBASIC20.04■□□□□ 0.8
FBXO40Q9UH90 IGHV3-65-201ENST00000523210 341 ntBASIC20.04■□□□□ 0.8
FBXO40Q9UH90 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.04■□□□□ 0.8
FBXO40Q9UH90 AC055717.3-201ENST00000622967 595 ntBASIC20.04■□□□□ 0.8
FBXO40Q9UH90 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms