Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AC004461.1-201ENST00000412461 403 ntBASIC17.53■□□□□ 0.4
NCDNQ9UBB6 SPDYE21P-201ENST00000413323 827 ntBASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AC007274.1-201ENST00000439805 662 ntBASIC17.53■□□□□ 0.4
NCDNQ9UBB6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 KRT19P2-202ENST00000557173 1012 ntBASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCDNQ9UBB6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 MTMR9LP-203ENST00000426597 1545 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC023141.5-201ENST00000458585 616 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC074386.1-202ENST00000463561 864 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC109322.1-201ENST00000524499 1264 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 DUX4L17-201ENST00000557360 1267 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC010654.1-201ENST00000615722 808 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC091812.2-201ENST00000619081 385 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 AC010507.1-201ENST00000633895 436 ntBASIC17.52■□□□□ 0.4
NCDNQ9UBB6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.52■□□□□ 0.4
NCDNQ9UBB6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 AL032819.2-201ENST00000624543 2162 ntBASIC17.52■□□□□ 0.39
NCDNQ9UBB6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.52■□□□□ 0.39
NCDNQ9UBB6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.51■□□□□ 0.39
NCDNQ9UBB6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 AC067863.1-201ENST00000494933 530 ntBASIC17.51■□□□□ 0.39
NCDNQ9UBB6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCDNQ9UBB6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms