Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB16Q9NRJ7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PCDHB16Q9NRJ7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB16Q9NRJ7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB16Q9NRJ7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHB16Q9NRJ7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHB16Q9NRJ7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 SNORA78-201ENST00000459373 127 ntBASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 DUTP2-201ENST00000519164 463 ntBASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB16Q9NRJ7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
PCDHB16Q9NRJ7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB16Q9NRJ7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB16Q9NRJ7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.46■□□□□ 0.06
PCDHB16Q9NRJ7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB16Q9NRJ7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 AC092850.2-201ENST00000623821 2697 ntBASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 AC092338.2-201ENST00000568827 1415 ntBASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 FITM1-202ENST00000559294 800 ntBASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB16Q9NRJ7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 FLJ38576-201ENST00000623820 2459 ntBASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 RBM17P1-201ENST00000453646 1190 ntBASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHB16Q9NRJ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms