Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.48□□□□□ -0.25
VGLL1Q99990 C2orf69P3-201ENST00000565542 1120 ntBASIC13.48□□□□□ -0.25
VGLL1Q99990 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.47□□□□□ -0.25
VGLL1Q99990 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.47□□□□□ -0.25
VGLL1Q99990 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.47□□□□□ -0.25
VGLL1Q99990 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 AC022898.2-201ENST00000616822 1312 ntBASIC13.47□□□□□ -0.25
VGLL1Q99990 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.47□□□□□ -0.25
VGLL1Q99990 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.47□□□□□ -0.25
VGLL1Q99990 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.47□□□□□ -0.25
VGLL1Q99990 SEC1P-202ENST00000473944 940 ntBASIC13.47□□□□□ -0.25
VGLL1Q99990 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.47□□□□□ -0.25
VGLL1Q99990 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.47□□□□□ -0.25
VGLL1Q99990 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 AC024243.1-201ENST00000609234 778 ntBASIC13.47□□□□□ -0.25
VGLL1Q99990 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.47□□□□□ -0.25
VGLL1Q99990 TMEM191A-211ENST00000637163 1067 ntBASIC13.47□□□□□ -0.25
VGLL1Q99990 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VGLL1Q99990 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
VGLL1Q99990 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VGLL1Q99990 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VGLL1Q99990 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VGLL1Q99990 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
VGLL1Q99990 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.46□□□□□ -0.25
VGLL1Q99990 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
VGLL1Q99990 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.46□□□□□ -0.25
VGLL1Q99990 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VGLL1Q99990 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.46□□□□□ -0.25
VGLL1Q99990 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.46□□□□□ -0.25
VGLL1Q99990 AC010653.2-201ENST00000623505 997 ntBASIC13.46□□□□□ -0.25
VGLL1Q99990 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VGLL1Q99990 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
VGLL1Q99990 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.46□□□□□ -0.26
VGLL1Q99990 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms