Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.56■□□□□ 0.56
SMOQ99835 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 NKAPP1-205ENST00000585790 367 ntBASIC18.56■□□□□ 0.56
SMOQ99835 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.56■□□□□ 0.56
SMOQ99835 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.56■□□□□ 0.56
SMOQ99835 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.56■□□□□ 0.56
SMOQ99835 AL356309.3-201ENST00000624132 1934 ntBASIC18.56■□□□□ 0.56
SMOQ99835 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMOQ99835 AC079776.2-201ENST00000641154 1609 ntBASIC18.56■□□□□ 0.56
SMOQ99835 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMOQ99835 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMOQ99835 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMOQ99835 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.55■□□□□ 0.56
SMOQ99835 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.55■□□□□ 0.56
SMOQ99835 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 AC002558.1-201ENST00000488906 803 ntBASIC18.55■□□□□ 0.56
SMOQ99835 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMOQ99835 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SMOQ99835 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.55■□□□□ 0.56
SMOQ99835 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.55■□□□□ 0.56
SMOQ99835 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMOQ99835 AC148477.8-201ENST00000624298 468 ntBASIC18.55■□□□□ 0.56
SMOQ99835 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.55■□□□□ 0.56
SMOQ99835 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.55■□□□□ 0.56
SMOQ99835 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMOQ99835 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SMOQ99835 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.54■□□□□ 0.56
SMOQ99835 AC018470.1-201ENST00000624790 3129 ntBASIC18.54■□□□□ 0.56
SMOQ99835 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.54■□□□□ 0.56
SMOQ99835 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.54■□□□□ 0.56
SMOQ99835 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 SPDYE21P-201ENST00000413323 827 ntBASIC18.54■□□□□ 0.56
SMOQ99835 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.54■□□□□ 0.56
SMOQ99835 AC073592.4-201ENST00000623827 446 ntBASIC18.54■□□□□ 0.56
SMOQ99835 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SMOQ99835 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMOQ99835 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMOQ99835 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 AC004817.3-201ENST00000602957 2129 ntBASIC18.53■□□□□ 0.56
SMOQ99835 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.53■□□□□ 0.56
SMOQ99835 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.53■□□□□ 0.56
SMOQ99835 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.53■□□□□ 0.56
SMOQ99835 SCARNA2-201ENST00000458748 420 ntBASIC18.53■□□□□ 0.56
SMOQ99835 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SMOQ99835 BX005266.1-201ENST00000473402 457 ntBASIC18.53■□□□□ 0.56
SMOQ99835 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms