Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE1Q99829 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPNE1Q99829 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CPNE1Q99829 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CPNE1Q99829 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CPNE1Q99829 LIN28AP1-201ENST00000429574 405 ntBASIC17.73■□□□□ 0.43
CPNE1Q99829 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 AL441883.1-201ENST00000566170 1045 ntBASIC17.73■□□□□ 0.43
CPNE1Q99829 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE1Q99829 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE1Q99829 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE1Q99829 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CPNE1Q99829 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE1Q99829 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CPNE1Q99829 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE1Q99829 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE1Q99829 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE1Q99829 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPNE1Q99829 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE1Q99829 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE1Q99829 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE1Q99829 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 STARP1-201ENST00000397973 869 ntBASIC17.72■□□□□ 0.43
CPNE1Q99829 FAM8A6P-201ENST00000407496 1135 ntBASIC17.72■□□□□ 0.43
CPNE1Q99829 AC005104.2-201ENST00000427818 678 ntBASIC17.72■□□□□ 0.43
CPNE1Q99829 ATP5G1P1-201ENST00000448724 379 ntBASIC17.72■□□□□ 0.43
CPNE1Q99829 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPNE1Q99829 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE1Q99829 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPNE1Q99829 AC016396.2-201ENST00000562575 1417 ntBASIC17.72■□□□□ 0.43
CPNE1Q99829 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE1Q99829 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPNE1Q99829 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPNE1Q99829 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE1Q99829 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 SPDYE15P-201ENST00000424157 909 ntBASIC17.71■□□□□ 0.43
CPNE1Q99829 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.71■□□□□ 0.43
CPNE1Q99829 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE1Q99829 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE1Q99829 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE1Q99829 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE1Q99829 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CPNE1Q99829 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.71■□□□□ 0.42
CPNE1Q99829 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
CPNE1Q99829 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CPNE1Q99829 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms