Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 AC091607.1-201ENST00000490318 1060 ntBASIC20.97■□□□□ 0.95
NEK1Q96PY6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 AL138831.2-201ENST00000606564 490 ntBASIC20.97■□□□□ 0.95
NEK1Q96PY6 AL358472.4-201ENST00000633140 710 ntBASIC20.97■□□□□ 0.95
NEK1Q96PY6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEK1Q96PY6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 AC246785.2-201ENST00000432512 513 ntBASIC20.96■□□□□ 0.95
NEK1Q96PY6 AC007967.3-201ENST00000434308 558 ntBASIC20.96■□□□□ 0.95
NEK1Q96PY6 AP002383.4-201ENST00000442518 975 ntBASIC20.96■□□□□ 0.95
NEK1Q96PY6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NEK1Q96PY6 AL645608.8-201ENST00000606034 2086 ntBASIC20.96■□□□□ 0.95
NEK1Q96PY6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEK1Q96PY6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.95■□□□□ 0.95
NEK1Q96PY6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NEK1Q96PY6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 AP005901.3-202ENST00000581653 237 ntBASIC20.95■□□□□ 0.94
NEK1Q96PY6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.95■□□□□ 0.94
NEK1Q96PY6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 KRT18P1-202ENST00000452408 1331 ntBASIC20.95■□□□□ 0.94
NEK1Q96PY6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.95■□□□□ 0.94
NEK1Q96PY6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEK1Q96PY6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
NEK1Q96PY6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms