Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 NUS1P2-201ENST00000417358 873 ntBASIC14.74□□□□□ -0.05
GAFA1Q96PS6 POM121L3P-201ENST00000419331 1163 ntBASIC14.74□□□□□ -0.05
GAFA1Q96PS6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 AC122714.2-201ENST00000502787 707 ntBASIC14.74□□□□□ -0.05
GAFA1Q96PS6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 AC114341.1-201ENST00000618070 349 ntBASIC14.74□□□□□ -0.05
GAFA1Q96PS6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 LINC01451-201ENST00000623792 534 ntBASIC14.74□□□□□ -0.05
GAFA1Q96PS6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GAFA1Q96PS6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 RCN1P2-201ENST00000398357 915 ntBASIC14.73□□□□□ -0.05
GAFA1Q96PS6 AC005104.2-201ENST00000427818 678 ntBASIC14.73□□□□□ -0.05
GAFA1Q96PS6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 AC133963.1-201ENST00000504166 1679 ntBASIC14.73□□□□□ -0.05
GAFA1Q96PS6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 HLA-J-201ENST00000462773 1622 ntBASIC14.73□□□□□ -0.05
GAFA1Q96PS6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 SIRPAP1-201ENST00000448467 1770 ntBASIC14.73□□□□□ -0.05
GAFA1Q96PS6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GAFA1Q96PS6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 NUS1P1-201ENST00000446295 882 ntBASIC14.72□□□□□ -0.05
GAFA1Q96PS6 FOSL1P1-201ENST00000511041 816 ntBASIC14.72□□□□□ -0.05
GAFA1Q96PS6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 INTS4P1-201ENST00000438455 1935 ntBASIC14.72□□□□□ -0.05
GAFA1Q96PS6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GAFA1Q96PS6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms