Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 MIR662-201ENST00000384847 95 ntBASIC16.78■□□□□ 0.28
COL21A1Q96P44 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 KRT89P-201ENST00000620027 1478 ntBASIC16.78■□□□□ 0.28
COL21A1Q96P44 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 AC132938.6-201ENST00000623828 1655 ntBASIC16.78■□□□□ 0.28
COL21A1Q96P44 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.78■□□□□ 0.28
COL21A1Q96P44 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL21A1Q96P44 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 AC080080.1-201ENST00000625121 2420 ntBASIC16.77■□□□□ 0.28
COL21A1Q96P44 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 AC108860.2-201ENST00000562760 2183 ntBASIC16.77■□□□□ 0.28
COL21A1Q96P44 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 SPDYE13P-201ENST00000445314 798 ntBASIC16.77■□□□□ 0.28
COL21A1Q96P44 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 AL136038.3-201ENST00000561909 1096 ntBASIC16.77■□□□□ 0.28
COL21A1Q96P44 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL21A1Q96P44 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.77■□□□□ 0.28
COL21A1Q96P44 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
COL21A1Q96P44 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.77■□□□□ 0.27
COL21A1Q96P44 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.77■□□□□ 0.27
COL21A1Q96P44 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL21A1Q96P44 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 AC084018.2-201ENST00000613093 2607 ntBASIC16.76■□□□□ 0.27
COL21A1Q96P44 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 AP003733.1-201ENST00000491725 852 ntBASIC16.76■□□□□ 0.27
COL21A1Q96P44 DUTP2-201ENST00000519164 463 ntBASIC16.76■□□□□ 0.27
COL21A1Q96P44 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms