Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 NOC2LP1-202ENST00000452600 2235 ntBASIC18.27■□□□□ 0.52
RPRD1AQ96P16 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 RN7SL510P-201ENST00000581311 263 ntBASIC18.27■□□□□ 0.52
RPRD1AQ96P16 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPRD1AQ96P16 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 AC018470.1-201ENST00000624790 3129 ntBASIC18.27■□□□□ 0.51
RPRD1AQ96P16 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.27■□□□□ 0.51
RPRD1AQ96P16 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 COX5BP2-201ENST00000392354 334 ntBASIC18.26■□□□□ 0.51
RPRD1AQ96P16 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AC132008.2-207ENST00000454517 770 ntBASIC18.26■□□□□ 0.51
RPRD1AQ96P16 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 BX276092.7-203ENST00000637198 1536 ntBASIC18.26■□□□□ 0.51
RPRD1AQ96P16 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.26■□□□□ 0.51
RPRD1AQ96P16 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms