Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CALR3Q96L12 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 KRT8P47-201ENST00000604727 1398 ntBASIC18.78■□□□□ 0.6
CALR3Q96L12 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CALR3Q96L12 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CALR3Q96L12 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.77■□□□□ 0.6
CALR3Q96L12 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 KRT8P9-201ENST00000558927 1449 ntBASIC18.77■□□□□ 0.6
CALR3Q96L12 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CALR3Q96L12 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.77■□□□□ 0.6
CALR3Q96L12 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CALR3Q96L12 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CALR3Q96L12 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CALR3Q96L12 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.77■□□□□ 0.59
CALR3Q96L12 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.59
CALR3Q96L12 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CALR3Q96L12 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CALR3Q96L12 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CALR3Q96L12 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CALR3Q96L12 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CALR3Q96L12 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CALR3Q96L12 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.76■□□□□ 0.59
CALR3Q96L12 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CALR3Q96L12 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
CALR3Q96L12 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.76■□□□□ 0.59
CALR3Q96L12 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
CALR3Q96L12 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.76■□□□□ 0.59
CALR3Q96L12 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.76■□□□□ 0.59
CALR3Q96L12 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.76■□□□□ 0.59
CALR3Q96L12 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CALR3Q96L12 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CALR3Q96L12 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.75■□□□□ 0.59
CALR3Q96L12 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CALR3Q96L12 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.75■□□□□ 0.59
CALR3Q96L12 AL138966.2-201ENST00000621997 464 ntBASIC18.75■□□□□ 0.59
CALR3Q96L12 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 LINC01568-207ENST00000641790 1380 ntBASIC18.75■□□□□ 0.59
CALR3Q96L12 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.75■□□□□ 0.59
CALR3Q96L12 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CALR3Q96L12 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.75■□□□□ 0.59
CALR3Q96L12 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.75■□□□□ 0.59
CALR3Q96L12 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms