Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD4Q96DM1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 SPDYE21P-201ENST00000413323 827 ntBASIC19.17■□□□□ 0.66
PGBD4Q96DM1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 AC012640.2-201ENST00000561606 901 ntBASIC19.17■□□□□ 0.66
PGBD4Q96DM1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD4Q96DM1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 AC006538.3-201ENST00000612495 578 ntBASIC19.16■□□□□ 0.66
PGBD4Q96DM1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 PMS2P7-201ENST00000506558 1336 ntBASIC19.16■□□□□ 0.66
PGBD4Q96DM1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 AC104109.2-201ENST00000602919 1418 ntBASIC19.16■□□□□ 0.66
PGBD4Q96DM1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PGBD4Q96DM1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 MIR940-201ENST00000401276 94 ntBASIC19.15■□□□□ 0.66
PGBD4Q96DM1 AL020989.1-201ENST00000422979 469 ntBASIC19.15■□□□□ 0.66
PGBD4Q96DM1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 POLD2P1-201ENST00000511220 997 ntBASIC19.15■□□□□ 0.66
PGBD4Q96DM1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 AC007613.1-201ENST00000572811 2597 ntBASIC19.15■□□□□ 0.66
PGBD4Q96DM1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 AL353593.2-201ENST00000602529 1483 ntBASIC19.15■□□□□ 0.66
PGBD4Q96DM1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 AC090164.3-201ENST00000610780 2143 ntBASIC19.15■□□□□ 0.66
PGBD4Q96DM1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD4Q96DM1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms