Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AC005332.8-201ENST00000622750 2735 ntBASIC17.06■□□□□ 0.32
UBE2E3Q969T4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 LINC00304-203ENST00000565008 1864 ntBASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 VENTXP7-201ENST00000475503 772 ntBASIC17.06■□□□□ 0.32
UBE2E3Q969T4 FAM86EP-206ENST00000510506 987 ntBASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.05■□□□□ 0.32
UBE2E3Q969T4 AC246785.2-201ENST00000432512 513 ntBASIC17.05■□□□□ 0.32
UBE2E3Q969T4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 AL353801.3-201ENST00000609898 542 ntBASIC17.05■□□□□ 0.32
UBE2E3Q969T4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2E3Q969T4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 AL138688.1-201ENST00000624851 1594 ntBASIC17.04■□□□□ 0.32
UBE2E3Q969T4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 AC116407.4-201ENST00000623319 1061 ntBASIC17.04■□□□□ 0.32
UBE2E3Q969T4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE2E3Q969T4 LETM1P2-201ENST00000597330 2178 ntBASIC17.04■□□□□ 0.32
UBE2E3Q969T4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2E3Q969T4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms