Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AF238378.1-201ENST00000526806 358 ntBASIC20.86■□□□□ 0.93
STAG1Q8WVM7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 LINC01451-201ENST00000623792 534 ntBASIC20.86■□□□□ 0.93
STAG1Q8WVM7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
STAG1Q8WVM7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 PMPCAP1-201ENST00000508114 1576 ntBASIC20.85■□□□□ 0.93
STAG1Q8WVM7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 AC018470.1-201ENST00000624790 3129 ntBASIC20.85■□□□□ 0.93
STAG1Q8WVM7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 AP002469.2-201ENST00000531724 424 ntBASIC20.85■□□□□ 0.93
STAG1Q8WVM7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
STAG1Q8WVM7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 AC109462.3-201ENST00000573934 613 ntBASIC20.84■□□□□ 0.93
STAG1Q8WVM7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 AP005117.1-201ENST00000584346 1413 ntBASIC20.84■□□□□ 0.93
STAG1Q8WVM7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
STAG1Q8WVM7 GNAS-203ENST00000306120 1878 ntBASIC20.84■□□□□ 0.93
STAG1Q8WVM7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 AL133373.2-201ENST00000623187 2828 ntBASIC20.83■□□□□ 0.93
STAG1Q8WVM7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 RBM17P3-201ENST00000417687 1192 ntBASIC20.83■□□□□ 0.93
STAG1Q8WVM7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.83■□□□□ 0.93
STAG1Q8WVM7 AL355312.1-201ENST00000407115 2176 ntBASIC20.83■□□□□ 0.92
STAG1Q8WVM7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
STAG1Q8WVM7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
STAG1Q8WVM7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms