Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ABCD1P5-201ENST00000445663 754 ntBASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 REXO1L6P-202ENST00000619970 1078 ntBASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 AL691432.3-201ENST00000621860 400 ntBASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 REXO1L11P-201ENST00000620964 1927 ntBASIC17.51■□□□□ 0.39
TRAM1L1Q8N609 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 AL049757.1-201ENST00000616842 1596 ntBASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 AL353593.2-201ENST00000602529 1483 ntBASIC17.5■□□□□ 0.39
TRAM1L1Q8N609 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AKR1C7P-201ENST00000305623 895 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 SAPCD2P3-201ENST00000455031 850 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AC106795.1-205ENST00000512851 1056 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 IGHV3-52-201ENST00000519770 353 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AC109462.3-201ENST00000573934 613 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AP001269.4-201ENST00000609611 512 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AP000867.4-201ENST00000641616 219 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 GNAS-203ENST00000306120 1878 ntBASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAM1L1Q8N609 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 KRT8P10-201ENST00000450021 1447 ntBASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 LINC00304-203ENST00000565008 1864 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms