Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 REXO1L11P-201ENST00000620964 1927 ntBASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF440Q8IYI8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 FAM210CP-201ENST00000445714 574 ntBASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 RN7SL606P-201ENST00000472779 293 ntBASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF440Q8IYI8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF440Q8IYI8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF440Q8IYI8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF440Q8IYI8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF440Q8IYI8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AL031133.1-201ENST00000406807 723 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AL592071.1-201ENST00000611956 408 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 IGHV3-41-201ENST00000613121 348 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AC124864.1-201ENST00000623408 392 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AL590326.2-201ENST00000625139 305 ntBASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF440Q8IYI8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 COX5BP2-201ENST00000392354 334 ntBASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF440Q8IYI8 VENTXP7-201ENST00000475503 772 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms