Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 AC008687.5-201ENST00000593746 558 ntBASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM42Q8IWZ5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 AC132938.6-201ENST00000623828 1655 ntBASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 AC113410.3-201ENST00000623366 203 ntBASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM42Q8IWZ5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM42Q8IWZ5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM42Q8IWZ5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM42Q8IWZ5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 TSPY7P-201ENST00000431358 1114 ntBASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 AC104390.1-201ENST00000555663 520 ntBASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 MIR4674-201ENST00000582457 87 ntBASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms