Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN4BQ8IWT1 ABALON-201ENST00000629058 1903 ntBASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 SART3-203ENST00000546611 1184 ntBASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 AP001005.1-201ENST00000571755 1248 ntBASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 FLJ13224-201ENST00000313737 1514 ntBASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN4BQ8IWT1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 AL356309.3-201ENST00000624132 1934 ntBASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCN4BQ8IWT1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 AC138028.4-201ENST00000564984 1845 ntBASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 AL031284.1-201ENST00000419297 478 ntBASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 AP000867.4-201ENST00000641616 219 ntBASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms