Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 AC006116.8-202ENST00000587620 1550 ntBASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LYSMD3Q7Z3D4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 MINOS1P3-201ENST00000457048 203 ntBASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 MIR3652-201ENST00000579335 131 ntBASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 AC010460.3-201ENST00000511359 1579 ntBASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD3Q7Z3D4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 AC096633.1-201ENST00000422446 749 ntBASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD3Q7Z3D4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 AC134043.2-201ENST00000624206 2238 ntBASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 DDX43P3-201ENST00000441064 443 ntBASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 BNIP3P18-201ENST00000593976 575 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms