Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNI2Q6ZMN8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCNI2Q6ZMN8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNI2Q6ZMN8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNI2Q6ZMN8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNI2Q6ZMN8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 AC106886.4-201ENST00000623557 2502 ntBASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 SLC25A1P2-201ENST00000430693 912 ntBASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 AC116407.4-201ENST00000623319 1061 ntBASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 AC105020.1-201ENST00000435356 2205 ntBASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNI2Q6ZMN8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 PCDH8P1-201ENST00000428983 2773 ntBASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNI2Q6ZMN8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 AL671277.2-201ENST00000458060 996 ntBASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms