Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CHRDL2Q6WN34 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRDL2Q6WN34 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHRDL2Q6WN34 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRDL2Q6WN34 AL137060.1-201ENST00000618151 2648 ntBASIC19.18■□□□□ 0.66
CHRDL2Q6WN34 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 AL592309.1-201ENST00000443127 649 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SPDYE11-202ENST00000450699 704 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SPDYE9P-201ENST00000570642 692 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 RN7SL121P-201ENST00000584223 273 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SPDYE10P-202ENST00000612005 668 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SPDYE8P-202ENST00000612377 668 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 AC096656.1-201ENST00000623826 1364 ntBASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRDL2Q6WN34 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 AC240504.1-201ENST00000395709 845 ntBASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 FAM58DP-201ENST00000428076 619 ntBASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 AC017083.2-201ENST00000608069 979 ntBASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 GGTLC5P-201ENST00000617623 998 ntBASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL2Q6WN34 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 SDHAP2-201ENST00000455183 2001 ntBASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 AC148477.5-201ENST00000625164 1645 ntBASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 PTCHD3P3-201ENST00000403073 906 ntBASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 CXCL1P1-201ENST00000502804 216 ntBASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 AC121493.1-201ENST00000602316 450 ntBASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL2Q6WN34 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms