Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC4Q6S5L8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 DUX4L26-201ENST00000489078 1255 ntBASIC19.98■□□□□ 0.79
SHC4Q6S5L8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.98■□□□□ 0.79
SHC4Q6S5L8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 AL671277.2-201ENST00000458060 996 ntBASIC19.97■□□□□ 0.79
SHC4Q6S5L8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 AC097374.2-201ENST00000618617 1306 ntBASIC19.97■□□□□ 0.79
SHC4Q6S5L8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SHC4Q6S5L8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 RN7SL606P-201ENST00000472779 293 ntBASIC19.96■□□□□ 0.79
SHC4Q6S5L8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
SHC4Q6S5L8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms