Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 HYMAI.1-201ENST00000620949 238 ntBASIC16.16■□□□□ 0.18
NIPAL3Q6P499 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NIPAL3Q6P499 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 VENTXP5-201ENST00000523979 775 ntBASIC16.15■□□□□ 0.18
NIPAL3Q6P499 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NIPAL3Q6P499 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
NIPAL3Q6P499 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NIPAL3Q6P499 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 AC087388.1-201ENST00000571370 1112 ntBASIC16.14■□□□□ 0.17
NIPAL3Q6P499 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 AC083849.1-201ENST00000615227 514 ntBASIC16.14■□□□□ 0.17
NIPAL3Q6P499 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NIPAL3Q6P499 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NIPAL3Q6P499 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms