Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTCRAQ6ISU1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PTCRAQ6ISU1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 AC018445.3-201ENST00000624177 1945 ntBASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 TREML5P-201ENST00000421694 576 ntBASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 STK19B-204ENST00000512515 211 ntBASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 AL161938.1-201ENST00000569833 2180 ntBASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTCRAQ6ISU1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 AC140878.1-201ENST00000565277 250 ntBASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTCRAQ6ISU1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 FAM58DP-201ENST00000428076 619 ntBASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 AC079140.1-201ENST00000508039 487 ntBASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 AC109462.3-201ENST00000573934 613 ntBASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTCRAQ6ISU1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 AC099522.2-201ENST00000607001 744 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms