Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 BOLA2P3-201ENST00000404566 256 ntBASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AC007431.3-201ENST00000623221 587 ntBASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AC128714.1-201ENST00000637035 887 ntBASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 AC093677.2-201ENST00000600169 1863 ntBASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 KRT18P41-201ENST00000518924 1277 ntBASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 SIRPAP1-201ENST00000448467 1770 ntBASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 AL023806.1-201ENST00000603994 1649 ntBASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL13A1Q5TAT6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 SPCS2P2-201ENST00000603270 608 ntBASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 LINC00565-201ENST00000562710 2331 ntBASIC19.68■□□□□ 0.74
COL13A1Q5TAT6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 AC097637.2-201ENST00000624096 1997 ntBASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms