Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
YBX1P67809 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 AC112698.1-201ENST00000510299 916 ntBASIC17.29■□□□□ 0.36
YBX1P67809 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.29■□□□□ 0.36
YBX1P67809 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.29■□□□□ 0.36
YBX1P67809 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.29■□□□□ 0.36
YBX1P67809 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YBX1P67809 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.28■□□□□ 0.36
YBX1P67809 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
YBX1P67809 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
YBX1P67809 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.28■□□□□ 0.36
YBX1P67809 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 AP001094.4-201ENST00000579008 2176 ntBASIC17.28■□□□□ 0.36
YBX1P67809 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
YBX1P67809 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
YBX1P67809 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
YBX1P67809 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
YBX1P67809 TOB2P1-201ENST00000469761 992 ntBASIC17.28■□□□□ 0.36
YBX1P67809 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.28■□□□□ 0.36
YBX1P67809 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.28■□□□□ 0.36
YBX1P67809 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
YBX1P67809 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.28■□□□□ 0.36
YBX1P67809 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.28■□□□□ 0.36
YBX1P67809 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.28■□□□□ 0.36
YBX1P67809 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
YBX1P67809 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.28■□□□□ 0.36
YBX1P67809 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
YBX1P67809 AC124067.4-201ENST00000519691 2379 ntBASIC17.28■□□□□ 0.36
YBX1P67809 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YBX1P67809 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.27■□□□□ 0.36
YBX1P67809 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.27■□□□□ 0.36
YBX1P67809 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.27■□□□□ 0.36
YBX1P67809 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.27■□□□□ 0.36
YBX1P67809 DRAXINP1-201ENST00000437611 948 ntBASIC17.27■□□□□ 0.36
YBX1P67809 LINC00265-3P-201ENST00000447588 903 ntBASIC17.27■□□□□ 0.36
YBX1P67809 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.27■□□□□ 0.36
YBX1P67809 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.27■□□□□ 0.36
YBX1P67809 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.27■□□□□ 0.36
YBX1P67809 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.27■□□□□ 0.36
YBX1P67809 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.27■□□□□ 0.36
YBX1P67809 AC005336.2-201ENST00000593183 939 ntBASIC17.27■□□□□ 0.36
YBX1P67809 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.27■□□□□ 0.36
YBX1P67809 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 AL355312.1-201ENST00000407115 2176 ntBASIC17.27■□□□□ 0.36
YBX1P67809 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YBX1P67809 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
YBX1P67809 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
YBX1P67809 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.27■□□□□ 0.35
YBX1P67809 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
YBX1P67809 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
YBX1P67809 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
YBX1P67809 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YBX1P67809 TNRC18P3-201ENST00000441896 2691 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms