Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ERVFC1-1P60608 C8orf49-201ENST00000525043 1968 ntBASIC13.82□□□□□ -0.2
ERVFC1-1P60608 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 NORAD-201ENST00000565493 5339 ntBASIC13.81□□□□□ -0.2
ERVFC1-1P60608 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 AC105020.1-201ENST00000435356 2205 ntBASIC13.81□□□□□ -0.2
ERVFC1-1P60608 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 AC093787.1-201ENST00000450396 207 ntBASIC13.81□□□□□ -0.2
ERVFC1-1P60608 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 AC098934.4-201ENST00000564127 592 ntBASIC13.81□□□□□ -0.2
ERVFC1-1P60608 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ERVFC1-1P60608 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 AC106886.4-201ENST00000623557 2502 ntBASIC13.8□□□□□ -0.2
ERVFC1-1P60608 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 AC097658.1-201ENST00000475555 843 ntBASIC13.8□□□□□ -0.2
ERVFC1-1P60608 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.8□□□□□ -0.2
ERVFC1-1P60608 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms