Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 AC009065.1-201ENST00000564055 1225 ntBASIC15.25■□□□□ 0.03
AP3S2P59780 CKBP1-201ENST00000565489 1086 ntBASIC15.25■□□□□ 0.03
AP3S2P59780 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP3S2P59780 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP3S2P59780 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
AP3S2P59780 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 AC126755.1-201ENST00000525846 6405 ntBASIC15.24■□□□□ 0.03
AP3S2P59780 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
AP3S2P59780 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
AP3S2P59780 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.24■□□□□ 0.03
AP3S2P59780 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP3S2P59780 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
AP3S2P59780 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
AP3S2P59780 MIR638-201ENST00000385237 100 ntBASIC15.24■□□□□ 0.03
AP3S2P59780 AC097658.1-201ENST00000475555 843 ntBASIC15.24■□□□□ 0.03
AP3S2P59780 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.24■□□□□ 0.03
AP3S2P59780 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.24■□□□□ 0.03
AP3S2P59780 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.24■□□□□ 0.03
AP3S2P59780 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP3S2P59780 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP3S2P59780 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP3S2P59780 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.24■□□□□ 0.03
AP3S2P59780 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP3S2P59780 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
AP3S2P59780 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP3S2P59780 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.23■□□□□ 0.03
AP3S2P59780 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3S2P59780 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP3S2P59780 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP3S2P59780 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.23■□□□□ 0.03
AP3S2P59780 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.23■□□□□ 0.03
AP3S2P59780 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.23■□□□□ 0.03
AP3S2P59780 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 AC099343.3-201ENST00000605834 2503 ntBASIC15.23■□□□□ 0.03
AP3S2P59780 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms