Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CDH12P55289 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH12P55289 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 ECEL1P3-201ENST00000427961 737 ntBASIC16.55■□□□□ 0.24
CDH12P55289 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH12P55289 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 AC092865.7-201ENST00000641832 219 ntBASIC16.55■□□□□ 0.24
CDH12P55289 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH12P55289 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH12P55289 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH12P55289 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH12P55289 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH12P55289 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CDH12P55289 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 LINC00304-203ENST00000565008 1864 ntBASIC16.54■□□□□ 0.24
CDH12P55289 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH12P55289 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 KRT18P22-201ENST00000402024 1347 ntBASIC16.54■□□□□ 0.24
CDH12P55289 AC022898.2-201ENST00000616822 1312 ntBASIC16.54■□□□□ 0.24
CDH12P55289 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH12P55289 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CDH12P55289 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH12P55289 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH12P55289 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH12P55289 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH12P55289 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH12P55289 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH12P55289 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH12P55289 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms