Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NR1H2P55055 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 KRT8P45-201ENST00000414328 1447 ntBASIC16.86■□□□□ 0.29
NR1H2P55055 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NR1H2P55055 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 AL096828.2-201ENST00000567259 1965 ntBASIC16.86■□□□□ 0.29
NR1H2P55055 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NR1H2P55055 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 AC004951.3-201ENST00000418645 1148 ntBASIC16.85■□□□□ 0.29
NR1H2P55055 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 TSPY21P-201ENST00000433481 731 ntBASIC16.85■□□□□ 0.29
NR1H2P55055 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.85■□□□□ 0.29
NR1H2P55055 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NR1H2P55055 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H2P55055 CROCCP2-202ENST00000412962 2773 ntBASIC16.85■□□□□ 0.29
NR1H2P55055 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.85■□□□□ 0.29
NR1H2P55055 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NR1H2P55055 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.85■□□□□ 0.29
NR1H2P55055 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H2P55055 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 TSPY14P-201ENST00000303979 915 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 CRYGFP-201ENST00000418459 633 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.84■□□□□ 0.29
NR1H2P55055 LIN28AP1-201ENST00000429574 405 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
NR1H2P55055 AC011506.1-201ENST00000474329 610 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 AP000692.2-201ENST00000608391 879 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 AC011298.2-201ENST00000617989 482 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 HLA-A-209ENST00000638375 975 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 AL138688.1-201ENST00000624851 1594 ntBASIC16.84■□□□□ 0.29
NR1H2P55055 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.84■□□□□ 0.29
NR1H2P55055 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NR1H2P55055 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR1H2P55055 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NR1H2P55055 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms