Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
EPHB3P54753 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.47■□□□□ 0.55
EPHB3P54753 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.47■□□□□ 0.55
EPHB3P54753 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.47■□□□□ 0.55
EPHB3P54753 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
EPHB3P54753 KRT18P3-201ENST00000451602 1288 ntBASIC18.47■□□□□ 0.55
EPHB3P54753 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.47■□□□□ 0.55
EPHB3P54753 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 AC019129.2-201ENST00000609837 1235 ntBASIC18.47■□□□□ 0.55
EPHB3P54753 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
EPHB3P54753 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.47■□□□□ 0.55
EPHB3P54753 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
EPHB3P54753 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
EPHB3P54753 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
EPHB3P54753 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EPHB3P54753 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 HTR7P1-202ENST00000624664 4411 ntBASIC18.46■□□□□ 0.55
EPHB3P54753 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
EPHB3P54753 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
EPHB3P54753 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
EPHB3P54753 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.46■□□□□ 0.55
EPHB3P54753 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 PGAM5P1-201ENST00000518923 814 ntBASIC18.46■□□□□ 0.55
EPHB3P54753 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.46■□□□□ 0.55
EPHB3P54753 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.46■□□□□ 0.55
EPHB3P54753 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.46■□□□□ 0.55
EPHB3P54753 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.46■□□□□ 0.55
EPHB3P54753 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
EPHB3P54753 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.46■□□□□ 0.55
EPHB3P54753 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 AC090164.3-201ENST00000610780 2143 ntBASIC18.46■□□□□ 0.55
EPHB3P54753 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EPHB3P54753 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
EPHB3P54753 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 AC073621.1-201ENST00000392730 636 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 MIR1233-2-201ENST00000408138 82 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 MIR1233-1-201ENST00000408722 82 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 AC009947.1-201ENST00000444350 727 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 RNA5SP416-201ENST00000516838 111 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
EPHB3P54753 NCF1C-201ENST00000438382 1427 ntBASIC18.45■□□□□ 0.54
EPHB3P54753 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.45■□□□□ 0.54
EPHB3P54753 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.45■□□□□ 0.54
EPHB3P54753 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB3P54753 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.45■□□□□ 0.54
EPHB3P54753 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
EPHB3P54753 AL020996.1-203ENST00000536896 2307 ntBASIC18.44■□□□□ 0.54
EPHB3P54753 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
EPHB3P54753 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms