Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP11P51784 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
USP11P51784 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP11P51784 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
USP11P51784 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP11P51784 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
USP11P51784 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.01■□□□□ 0.79
USP11P51784 EMBP1-201ENST00000458200 901 ntBASIC20.01■□□□□ 0.79
USP11P51784 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.01■□□□□ 0.79
USP11P51784 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.01■□□□□ 0.79
USP11P51784 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
USP11P51784 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.01■□□□□ 0.79
USP11P51784 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.01■□□□□ 0.79
USP11P51784 AC109462.3-201ENST00000573934 613 ntBASIC20.01■□□□□ 0.79
USP11P51784 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.01■□□□□ 0.79
USP11P51784 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP11P51784 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP11P51784 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.01■□□□□ 0.79
USP11P51784 LINC00304-203ENST00000565008 1864 ntBASIC20.01■□□□□ 0.79
USP11P51784 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20■□□□□ 0.79
USP11P51784 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
USP11P51784 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
USP11P51784 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20■□□□□ 0.79
USP11P51784 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20■□□□□ 0.79
USP11P51784 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
USP11P51784 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20■□□□□ 0.79
USP11P51784 FAAHP1-202ENST00000446499 1238 ntBASIC20■□□□□ 0.79
USP11P51784 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20■□□□□ 0.79
USP11P51784 IGHV3-52-201ENST00000519770 353 ntBASIC20■□□□□ 0.79
USP11P51784 AF238378.1-201ENST00000526806 358 ntBASIC20■□□□□ 0.79
USP11P51784 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
USP11P51784 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20■□□□□ 0.79
USP11P51784 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 AL355877.3-201ENST00000622820 899 ntBASIC20■□□□□ 0.79
USP11P51784 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20■□□□□ 0.79
USP11P51784 AC134043.2-201ENST00000624206 2238 ntBASIC20■□□□□ 0.79
USP11P51784 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20■□□□□ 0.79
USP11P51784 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
USP11P51784 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
USP11P51784 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP11P51784 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.99■□□□□ 0.79
USP11P51784 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.99■□□□□ 0.79
USP11P51784 AC068880.1-201ENST00000507289 2297 ntBASIC19.99■□□□□ 0.79
USP11P51784 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 AC004870.1-201ENST00000315132 882 ntBASIC19.99■□□□□ 0.79
USP11P51784 MYCLP1-201ENST00000372451 1075 ntBASIC19.99■□□□□ 0.79
USP11P51784 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.99■□□□□ 0.79
USP11P51784 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.99■□□□□ 0.79
USP11P51784 TPM4P1-201ENST00000436100 807 ntBASIC19.99■□□□□ 0.79
USP11P51784 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.99■□□□□ 0.79
USP11P51784 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.99■□□□□ 0.79
USP11P51784 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.99■□□□□ 0.79
USP11P51784 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.99■□□□□ 0.79
USP11P51784 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.99■□□□□ 0.79
USP11P51784 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.99■□□□□ 0.79
USP11P51784 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP11P51784 GNAS-203ENST00000306120 1878 ntBASIC19.99■□□□□ 0.79
USP11P51784 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms