Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL355312.1-201ENST00000407115 2176 ntBASIC16.51■□□□□ 0.23
RNF144AP50876 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 AL645929.1-201ENST00000420084 975 ntBASIC16.51■□□□□ 0.23
RNF144AP50876 TSPY12P-201ENST00000421279 868 ntBASIC16.51■□□□□ 0.23
RNF144AP50876 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF144AP50876 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF144AP50876 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF144AP50876 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF144AP50876 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF144AP50876 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF144AP50876 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 AL353692.3-201ENST00000407031 1396 ntBASIC16.51■□□□□ 0.23
RNF144AP50876 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF144AP50876 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF144AP50876 KRT18P55-202ENST00000578578 1546 ntBASIC16.5■□□□□ 0.23
RNF144AP50876 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF144AP50876 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF144AP50876 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF144AP50876 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF144AP50876 AC087388.1-201ENST00000571370 1112 ntBASIC16.5■□□□□ 0.23
RNF144AP50876 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.5■□□□□ 0.23
RNF144AP50876 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF144AP50876 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF144AP50876 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF144AP50876 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
RNF144AP50876 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF144AP50876 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 AL031133.1-201ENST00000406807 723 ntBASIC16.49■□□□□ 0.23
RNF144AP50876 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.49■□□□□ 0.23
RNF144AP50876 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.49■□□□□ 0.23
RNF144AP50876 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF144AP50876 GPR32P1-201ENST00000601788 811 ntBASIC16.49■□□□□ 0.23
RNF144AP50876 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms