Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 INTS4P1-201ENST00000438455 1935 ntBASIC18.67■□□□□ 0.58
TUBP50607 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBP50607 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 AL160237.2-201ENST00000556165 472 ntBASIC18.67■□□□□ 0.58
TUBP50607 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.67■□□□□ 0.58
TUBP50607 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 AL354751.1-201ENST00000412768 1863 ntBASIC18.67■□□□□ 0.58
TUBP50607 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBP50607 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBP50607 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBP50607 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TUBP50607 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBP50607 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBP50607 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBP50607 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
TUBP50607 AC079781.3-201ENST00000449110 356 ntBASIC18.66■□□□□ 0.58
TUBP50607 FDX1P1-201ENST00000449115 551 ntBASIC18.66■□□□□ 0.58
TUBP50607 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBP50607 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBP50607 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBP50607 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBP50607 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBP50607 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TUBP50607 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBP50607 KRT8P10-201ENST00000450021 1447 ntBASIC18.66■□□□□ 0.58
TUBP50607 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TUBP50607 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBP50607 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBP50607 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBP50607 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBP50607 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TUBP50607 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TUBP50607 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBP50607 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBP50607 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBP50607 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TUBP50607 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms