Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL121956.5-201ENST00000625261 221 ntBASIC18.45■□□□□ 0.54
MMP13P45452 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MMP13P45452 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP13P45452 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
MMP13P45452 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
MMP13P45452 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MMP13P45452 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 LINC00167-201ENST00000530583 1419 ntBASIC18.44■□□□□ 0.54
MMP13P45452 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 IGHGP-201ENST00000390555 1178 ntBASIC18.44■□□□□ 0.54
MMP13P45452 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP13P45452 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.44■□□□□ 0.54
MMP13P45452 KRT18P35-201ENST00000510488 1269 ntBASIC18.44■□□□□ 0.54
MMP13P45452 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.44■□□□□ 0.54
MMP13P45452 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 AL136038.3-201ENST00000561909 1096 ntBASIC18.44■□□□□ 0.54
MMP13P45452 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP13P45452 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP13P45452 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP13P45452 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP13P45452 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
MMP13P45452 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP13P45452 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MMP13P45452 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.43■□□□□ 0.54
MMP13P45452 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 GPR32P1-201ENST00000601788 811 ntBASIC18.43■□□□□ 0.54
MMP13P45452 AC004263.2-201ENST00000617183 678 ntBASIC18.43■□□□□ 0.54
MMP13P45452 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 AC132938.6-201ENST00000623828 1655 ntBASIC18.43■□□□□ 0.54
MMP13P45452 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.43■□□□□ 0.54
MMP13P45452 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP13P45452 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP13P45452 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
MMP13P45452 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
MMP13P45452 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP13P45452 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms