Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
GRIA1P42261 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.98■□□□□ 0.47
GRIA1P42261 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.98■□□□□ 0.47
GRIA1P42261 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.98■□□□□ 0.47
GRIA1P42261 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.98■□□□□ 0.47
GRIA1P42261 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
GRIA1P42261 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GRIA1P42261 AC090340.1-201ENST00000620778 4980 ntBASIC17.97■□□□□ 0.47
GRIA1P42261 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GRIA1P42261 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.97■□□□□ 0.47
GRIA1P42261 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.97■□□□□ 0.47
GRIA1P42261 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.97■□□□□ 0.47
GRIA1P42261 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.97■□□□□ 0.47
GRIA1P42261 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GRIA1P42261 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GRIA1P42261 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GRIA1P42261 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GRIA1P42261 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GRIA1P42261 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GRIA1P42261 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.96■□□□□ 0.47
GRIA1P42261 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.96■□□□□ 0.47
GRIA1P42261 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.96■□□□□ 0.47
GRIA1P42261 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.96■□□□□ 0.47
GRIA1P42261 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GRIA1P42261 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIA1P42261 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GRIA1P42261 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIA1P42261 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GRIA1P42261 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
GRIA1P42261 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GRIA1P42261 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
GRIA1P42261 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GRIA1P42261 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIA1P42261 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 AL671277.2-201ENST00000458060 996 ntBASIC17.95■□□□□ 0.46
GRIA1P42261 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.95■□□□□ 0.46
GRIA1P42261 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
GRIA1P42261 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GRIA1P42261 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GRIA1P42261 AC099398.1-201ENST00000567919 2776 ntBASIC17.95■□□□□ 0.46
GRIA1P42261 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIA1P42261 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GRIA1P42261 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GRIA1P42261 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIA1P42261 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.94■□□□□ 0.46
GRIA1P42261 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms