Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.04■□□□□ 0.48
NFKB1P19838 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NFKB1P19838 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NFKB1P19838 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.04■□□□□ 0.48
NFKB1P19838 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NFKB1P19838 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.04■□□□□ 0.48
NFKB1P19838 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.04■□□□□ 0.48
NFKB1P19838 AC016734.2-201ENST00000624325 1377 ntBASIC18.04■□□□□ 0.48
NFKB1P19838 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NFKB1P19838 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.03■□□□□ 0.48
NFKB1P19838 CHCHD2P8-201ENST00000429873 447 ntBASIC18.03■□□□□ 0.48
NFKB1P19838 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 KRT18P35-201ENST00000510488 1269 ntBASIC18.03■□□□□ 0.48
NFKB1P19838 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NFKB1P19838 AL121672.3-201ENST00000608644 468 ntBASIC18.03■□□□□ 0.48
NFKB1P19838 LINC01451-201ENST00000623792 534 ntBASIC18.03■□□□□ 0.48
NFKB1P19838 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 AC010460.3-201ENST00000511359 1579 ntBASIC18.03■□□□□ 0.48
NFKB1P19838 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.03■□□□□ 0.48
NFKB1P19838 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.03■□□□□ 0.48
NFKB1P19838 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.03■□□□□ 0.48
NFKB1P19838 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NFKB1P19838 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.02■□□□□ 0.48
NFKB1P19838 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NFKB1P19838 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NFKB1P19838 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 AC141586.5-201ENST00000624546 2050 ntBASIC18.02■□□□□ 0.48
NFKB1P19838 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NFKB1P19838 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.02■□□□□ 0.48
NFKB1P19838 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NFKB1P19838 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 AL353801.3-201ENST00000609898 542 ntBASIC18.02■□□□□ 0.48
NFKB1P19838 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NFKB1P19838 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.02■□□□□ 0.47
NFKB1P19838 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NFKB1P19838 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NFKB1P19838 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NFKB1P19838 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.02■□□□□ 0.47
NFKB1P19838 IER3-202ENST00000376377 1350 ntBASIC18.02■□□□□ 0.47
NFKB1P19838 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NFKB1P19838 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.02■□□□□ 0.47
NFKB1P19838 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NFKB1P19838 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.01■□□□□ 0.47
NFKB1P19838 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms