Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CFTRP13569 AC009949.1-201ENST00000623048 1830 ntBASIC30.09■■■□□ 2.41
CFTRP13569 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CFTRP13569 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC30.09■■■□□ 2.41
CFTRP13569 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFTRP13569 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CFTRP13569 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC30.08■■■□□ 2.41
CFTRP13569 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC30.08■■■□□ 2.41
CFTRP13569 TSPY16P-201ENST00000449843 468 ntBASIC30.08■■■□□ 2.41
CFTRP13569 FAM86C2P-203ENST00000528684 1004 ntBASIC30.08■■■□□ 2.41
CFTRP13569 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC30.08■■■□□ 2.41
CFTRP13569 AC008761.3-201ENST00000624803 892 ntBASIC30.08■■■□□ 2.41
CFTRP13569 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFTRP13569 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFTRP13569 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
CFTRP13569 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC30.08■■■□□ 2.41
CFTRP13569 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CFTRP13569 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CFTRP13569 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC30.07■■■□□ 2.41
CFTRP13569 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFTRP13569 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC30.07■■■□□ 2.4
CFTRP13569 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC30.07■■■□□ 2.4
CFTRP13569 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFTRP13569 RPL30-202ENST00000396070 440 ntTSL 2 BASIC30.07■■■□□ 2.4
CFTRP13569 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CFTRP13569 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC30.07■■■□□ 2.4
CFTRP13569 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC30.07■■■□□ 2.4
CFTRP13569 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC30.07■■■□□ 2.4
CFTRP13569 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC30.07■■■□□ 2.4
CFTRP13569 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
CFTRP13569 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC30.07■■■□□ 2.4
CFTRP13569 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CFTRP13569 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC30.07■■■□□ 2.4
CFTRP13569 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC30.07■■■□□ 2.4
CFTRP13569 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFTRP13569 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC30.06■■■□□ 2.4
CFTRP13569 CENPM-205ENST00000404067 905 ntTSL 3 BASIC30.06■■■□□ 2.4
CFTRP13569 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC30.06■■■□□ 2.4
CFTRP13569 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 AL135744.1-201ENST00000565098 629 ntBASIC30.06■■■□□ 2.4
CFTRP13569 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 AC073592.3-201ENST00000625118 1834 ntBASIC30.06■■■□□ 2.4
CFTRP13569 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 TUBB3P1-201ENST00000405796 1332 ntBASIC30.06■■■□□ 2.4
CFTRP13569 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CFTRP13569 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 GK-202ENST00000378941 458 ntTSL 3 BASIC30.06■■■□□ 2.4
CFTRP13569 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC30.06■■■□□ 2.4
CFTRP13569 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFTRP13569 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC30.05■■■□□ 2.4
CFTRP13569 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC30.05■■■□□ 2.4
CFTRP13569 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC30.05■■■□□ 2.4
CFTRP13569 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 RAC2-204ENST00000406508 893 ntTSL 5 BASIC30.05■■■□□ 2.4
CFTRP13569 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC30.05■■■□□ 2.4
CFTRP13569 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFTRP13569 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC30.05■■■□□ 2.4
CFTRP13569 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC30.05■■■□□ 2.4
CFTRP13569 BSG-214ENST00000614867 960 ntTSL 3 BASIC30.05■■■□□ 2.4
CFTRP13569 AC084121.4-201ENST00000641598 221 ntBASIC30.05■■■□□ 2.4
CFTRP13569 AF228730.8-201ENST00000642140 221 ntBASIC30.05■■■□□ 2.4
CFTRP13569 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 MYCLP1-201ENST00000372451 1075 ntBASIC30.04■■■□□ 2.4
CFTRP13569 MIR943-201ENST00000401286 94 ntBASIC30.04■■■□□ 2.4
CFTRP13569 AC107890.1-201ENST00000422478 521 ntBASIC30.04■■■□□ 2.4
CFTRP13569 SPDYE14P-201ENST00000442619 822 ntBASIC30.04■■■□□ 2.4
CFTRP13569 AC140878.1-201ENST00000565277 250 ntBASIC30.04■■■□□ 2.4
CFTRP13569 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFTRP13569 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFTRP13569 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFTRP13569 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFTRP13569 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC30.03■■■□□ 2.4
CFTRP13569 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFTRP13569 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFTRP13569 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC30.03■■■□□ 2.4
CFTRP13569 GRAP-202ENST00000395635 834 ntTSL 2 BASIC30.03■■■□□ 2.4
CFTRP13569 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFTRP13569 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC30.03■■■□□ 2.4
CFTRP13569 AL592309.1-201ENST00000443127 649 ntBASIC30.03■■■□□ 2.4
CFTRP13569 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC30.03■■■□□ 2.4
CFTRP13569 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC30.03■■■□□ 2.4
CFTRP13569 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC30.03■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms