Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.59■□□□□ 0.09
UBCP0CG48 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.59■□□□□ 0.09
UBCP0CG48 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBCP0CG48 CYP2D8P-201ENST00000433633 1490 ntBASIC15.59■□□□□ 0.09
UBCP0CG48 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
UBCP0CG48 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UBCP0CG48 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.58■□□□□ 0.09
UBCP0CG48 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.58■□□□□ 0.09
UBCP0CG48 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UBCP0CG48 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
UBCP0CG48 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
UBCP0CG48 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
UBCP0CG48 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.58■□□□□ 0.08
UBCP0CG48 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.58■□□□□ 0.08
UBCP0CG48 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.58■□□□□ 0.08
UBCP0CG48 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.58■□□□□ 0.08
UBCP0CG48 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.58■□□□□ 0.08
UBCP0CG48 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 AC010947.1-201ENST00000623454 693 ntBASIC15.58■□□□□ 0.08
UBCP0CG48 AL157888.1-201ENST00000631930 593 ntBASIC15.58■□□□□ 0.08
UBCP0CG48 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBCP0CG48 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
UBCP0CG48 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
UBCP0CG48 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
UBCP0CG48 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
UBCP0CG48 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.57■□□□□ 0.08
UBCP0CG48 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.57■□□□□ 0.08
UBCP0CG48 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 KRT18P65-201ENST00000439811 1286 ntBASIC15.57■□□□□ 0.08
UBCP0CG48 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.57■□□□□ 0.08
UBCP0CG48 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.57■□□□□ 0.08
UBCP0CG48 AC034232.1-201ENST00000506026 1064 ntBASIC15.57■□□□□ 0.08
UBCP0CG48 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
UBCP0CG48 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.57■□□□□ 0.08
UBCP0CG48 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.57■□□□□ 0.08
UBCP0CG48 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
UBCP0CG48 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
UBCP0CG48 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
UBCP0CG48 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
UBCP0CG48 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.57■□□□□ 0.08
UBCP0CG48 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UBCP0CG48 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
UBCP0CG48 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms