Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.23■□□□□ 0.83
TPM2P07951 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
TPM2P07951 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM2P07951 AP001412.1-201ENST00000608405 714 ntBASIC20.23■□□□□ 0.83
TPM2P07951 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TPM2P07951 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.23■□□□□ 0.83
TPM2P07951 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TPM2P07951 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.23■□□□□ 0.83
TPM2P07951 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TPM2P07951 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TPM2P07951 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.22■□□□□ 0.83
TPM2P07951 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TPM2P07951 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 CA15P1-201ENST00000481698 905 ntBASIC20.22■□□□□ 0.83
TPM2P07951 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TPM2P07951 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 GPAT2P1-201ENST00000444924 1672 ntBASIC20.22■□□□□ 0.83
TPM2P07951 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TPM2P07951 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
TPM2P07951 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM2P07951 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM2P07951 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM2P07951 HYMAI-201ENST00000635591 3347 ntBASIC20.21■□□□□ 0.83
TPM2P07951 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.21■□□□□ 0.83
TPM2P07951 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
TPM2P07951 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.21■□□□□ 0.83
TPM2P07951 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.21■□□□□ 0.83
TPM2P07951 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.21■□□□□ 0.83
TPM2P07951 AC097488.1-201ENST00000507834 756 ntBASIC20.21■□□□□ 0.83
TPM2P07951 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM2P07951 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.21■□□□□ 0.83
TPM2P07951 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM2P07951 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM2P07951 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TPM2P07951 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM2P07951 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM2P07951 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TPM2P07951 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM2P07951 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TPM2P07951 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 NUDT16P1-203ENST00000513809 620 ntBASIC20.2■□□□□ 0.82
TPM2P07951 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM2P07951 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.2■□□□□ 0.82
TPM2P07951 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.2■□□□□ 0.82
TPM2P07951 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.2■□□□□ 0.82
TPM2P07951 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.2■□□□□ 0.82
TPM2P07951 ITM2C-210ENST00000620962 501 ntBASIC20.2■□□□□ 0.82
TPM2P07951 FLJ13224-201ENST00000313737 1514 ntBASIC20.2■□□□□ 0.82
TPM2P07951 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM2P07951 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM2P07951 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM2P07951 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms