Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGN1P05114 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGN1P05114 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGN1P05114 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGN1P05114 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 AC124067.4-201ENST00000519691 2379 ntBASIC16.08■□□□□ 0.17
HMGN1P05114 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HMGN1P05114 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 AC009949.1-201ENST00000623048 1830 ntBASIC16.08■□□□□ 0.17
HMGN1P05114 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HMGN1P05114 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HMGN1P05114 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HMGN1P05114 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HMGN1P05114 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.08■□□□□ 0.16
HMGN1P05114 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGN1P05114 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.08■□□□□ 0.16
HMGN1P05114 Z99916.2-201ENST00000604037 246 ntBASIC16.08■□□□□ 0.16
HMGN1P05114 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.08■□□□□ 0.16
HMGN1P05114 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGN1P05114 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGN1P05114 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.08■□□□□ 0.16
HMGN1P05114 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 AC046158.3-201ENST00000624947 2558 ntBASIC16.08■□□□□ 0.16
HMGN1P05114 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGN1P05114 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.08■□□□□ 0.16
HMGN1P05114 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HMGN1P05114 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HMGN1P05114 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 REXO1L11P-201ENST00000620964 1927 ntBASIC16.07■□□□□ 0.16
HMGN1P05114 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 AC009947.2-201ENST00000444014 672 ntBASIC16.07■□□□□ 0.16
HMGN1P05114 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 AC098590.1-201ENST00000468126 897 ntBASIC16.07■□□□□ 0.16
HMGN1P05114 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGN1P05114 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 AC016396.2-201ENST00000562575 1417 ntBASIC16.07■□□□□ 0.16
HMGN1P05114 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGN1P05114 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGN1P05114 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
HMGN1P05114 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGN1P05114 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HMGN1P05114 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
HMGN1P05114 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGN1P05114 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms