Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 ESRRAP1-201ENST00000400596 1257 ntBASIC15.33■□□□□ 0.04
HLA-DQB1P01920 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 AC011506.1-201ENST00000474329 610 ntBASIC15.33■□□□□ 0.04
HLA-DQB1P01920 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 AC026271.3-201ENST00000571884 352 ntBASIC15.33■□□□□ 0.04
HLA-DQB1P01920 MIR3180-5-201ENST00000583743 153 ntBASIC15.33■□□□□ 0.04
HLA-DQB1P01920 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 KRT16P1-201ENST00000399124 1418 ntBASIC15.33■□□□□ 0.04
HLA-DQB1P01920 HOXB1-202ENST00000577092 1414 ntBASIC15.33■□□□□ 0.04
HLA-DQB1P01920 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB1P01920 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 AL353807.1-201ENST00000427475 662 ntBASIC15.32■□□□□ 0.04
HLA-DQB1P01920 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 AL031985.4-201ENST00000642138 673 ntBASIC15.32■□□□□ 0.04
HLA-DQB1P01920 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB1P01920 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 KRT18P6-201ENST00000555540 1265 ntBASIC15.31■□□□□ 0.04
HLA-DQB1P01920 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 AC078925.2-201ENST00000624013 1973 ntBASIC15.31■□□□□ 0.04
HLA-DQB1P01920 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DQB1P01920 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms