Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMP1P01033 AC002056.1-201ENST00000395613 760 ntBASIC19.03■□□□□ 0.64
TIMP1P01033 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP1P01033 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.03■□□□□ 0.64
TIMP1P01033 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP1P01033 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMP1P01033 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.03■□□□□ 0.64
TIMP1P01033 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.03■□□□□ 0.64
TIMP1P01033 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMP1P01033 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 BX276092.7-203ENST00000637198 1536 ntBASIC19.03■□□□□ 0.64
TIMP1P01033 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TIMP1P01033 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMP1P01033 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMP1P01033 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.03■□□□□ 0.64
TIMP1P01033 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TIMP1P01033 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
TIMP1P01033 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.02■□□□□ 0.64
TIMP1P01033 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMP1P01033 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
TIMP1P01033 BASP1P1-201ENST00000430708 665 ntBASIC19.02■□□□□ 0.64
TIMP1P01033 AC055876.3-201ENST00000431496 288 ntBASIC19.02■□□□□ 0.64
TIMP1P01033 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 FAM86C2P-203ENST00000528684 1004 ntBASIC19.02■□□□□ 0.64
TIMP1P01033 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMP1P01033 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMP1P01033 AC087641.1-201ENST00000557561 1021 ntBASIC19.02■□□□□ 0.64
TIMP1P01033 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.02■□□□□ 0.64
TIMP1P01033 AC138649.4-201ENST00000612222 287 ntBASIC19.02■□□□□ 0.64
TIMP1P01033 AC116407.2-201ENST00000613639 860 ntBASIC19.02■□□□□ 0.64
TIMP1P01033 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMP1P01033 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMP1P01033 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
TIMP1P01033 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TIMP1P01033 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.02■□□□□ 0.63
TIMP1P01033 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.02■□□□□ 0.63
TIMP1P01033 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.02■□□□□ 0.63
TIMP1P01033 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TIMP1P01033 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.02■□□□□ 0.63
TIMP1P01033 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.02■□□□□ 0.63
TIMP1P01033 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TIMP1P01033 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TIMP1P01033 AL590787.1-201ENST00000568856 1315 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 AL671277.1-201ENST00000429656 993 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 AC005237.2-201ENST00000434368 219 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 CNN2P2-201ENST00000443536 909 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 CNN2P3-201ENST00000450201 906 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.01■□□□□ 0.63
TIMP1P01033 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.01■□□□□ 0.63
TIMP1P01033 ACTL9-202ENST00000612068 1252 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.01■□□□□ 0.63
TIMP1P01033 AL136317.3-201ENST00000618497 906 ntBASIC19.01■□□□□ 0.63
TIMP1P01033 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.01■□□□□ 0.63
TIMP1P01033 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TIMP1P01033 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TIMP1P01033 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.01■□□□□ 0.63
TIMP1P01033 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMP1P01033 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TIMP1P01033 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19■□□□□ 0.63
TIMP1P01033 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19■□□□□ 0.63
TIMP1P01033 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19■□□□□ 0.63
TIMP1P01033 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 AC236430.1-201ENST00000402231 743 ntBASIC19■□□□□ 0.63
TIMP1P01033 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19■□□□□ 0.63
TIMP1P01033 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19■□□□□ 0.63
TIMP1P01033 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19■□□□□ 0.63
TIMP1P01033 TERF1P3-201ENST00000505638 1227 ntBASIC19■□□□□ 0.63
TIMP1P01033 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19■□□□□ 0.63
TIMP1P01033 AC051619.7-201ENST00000568314 623 ntBASIC19■□□□□ 0.63
TIMP1P01033 AC012645.4-201ENST00000610691 1061 ntBASIC19■□□□□ 0.63
TIMP1P01033 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19■□□□□ 0.63
TIMP1P01033 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms