Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SOX30O94993 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.54■□□□□ 0.24
SOX30O94993 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SOX30O94993 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.54■□□□□ 0.24
SOX30O94993 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SOX30O94993 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.54■□□□□ 0.24
SOX30O94993 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SOX30O94993 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.54■□□□□ 0.24
SOX30O94993 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX30O94993 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SOX30O94993 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 HLA-J-201ENST00000462773 1622 ntBASIC16.53■□□□□ 0.24
SOX30O94993 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX30O94993 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX30O94993 AL138688.1-201ENST00000624851 1594 ntBASIC16.53■□□□□ 0.24
SOX30O94993 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.53■□□□□ 0.24
SOX30O94993 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.53■□□□□ 0.24
SOX30O94993 AC087388.1-201ENST00000571370 1112 ntBASIC16.53■□□□□ 0.24
SOX30O94993 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.53■□□□□ 0.24
SOX30O94993 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.53■□□□□ 0.24
SOX30O94993 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SOX30O94993 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX30O94993 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SOX30O94993 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 AC100803.2-201ENST00000562459 1963 ntBASIC16.53■□□□□ 0.24
SOX30O94993 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SOX30O94993 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX30O94993 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SOX30O94993 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 AC012313.1-201ENST00000593393 3059 ntBASIC16.52■□□□□ 0.24
SOX30O94993 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.52■□□□□ 0.24
SOX30O94993 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SOX30O94993 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.52■□□□□ 0.24
SOX30O94993 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
SOX30O94993 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SOX30O94993 VENTXP5-201ENST00000523979 775 ntBASIC16.52■□□□□ 0.24
SOX30O94993 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.52■□□□□ 0.24
SOX30O94993 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.52■□□□□ 0.24
SOX30O94993 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX30O94993 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SOX30O94993 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.52■□□□□ 0.23
SOX30O94993 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX30O94993 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.52■□□□□ 0.23
SOX30O94993 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX30O94993 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX30O94993 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
SOX30O94993 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SOX30O94993 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX30O94993 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX30O94993 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SOX30O94993 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SOX30O94993 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX30O94993 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms