Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SPDYE9P-201ENST00000570642 692 ntBASIC7.83□□□□□ -1.16
USH2AO75445 STK25P1-201ENST00000585406 838 ntBASIC7.83□□□□□ -1.16
USH2AO75445 SPDYE10P-202ENST00000612005 668 ntBASIC7.83□□□□□ -1.16
USH2AO75445 SPDYE8P-202ENST00000612377 668 ntBASIC7.83□□□□□ -1.16
USH2AO75445 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 AC009477.1-201ENST00000452936 217 ntBASIC7.83□□□□□ -1.16
USH2AO75445 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 FAM86C2P-203ENST00000528684 1004 ntBASIC7.83□□□□□ -1.16
USH2AO75445 AL158211.3-201ENST00000607385 239 ntBASIC7.83□□□□□ -1.16
USH2AO75445 AL138828.2-201ENST00000615812 383 ntBASIC7.83□□□□□ -1.16
USH2AO75445 MIR6775-201ENST00000617557 69 ntBASIC7.83□□□□□ -1.16
USH2AO75445 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USH2AO75445 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USH2AO75445 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 AC132938.2-201ENST00000579188 680 ntBASIC7.83□□□□□ -1.16
USH2AO75445 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 AL591163.1-201ENST00000641757 987 ntBASIC7.83□□□□□ -1.16
USH2AO75445 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 GID4-202ENST00000376345 1391 ntTSL 3 BASIC7.83□□□□□ -1.16
USH2AO75445 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 MFF-223ENST00000524634 647 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
USH2AO75445 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC7.83□□□□□ -1.16
USH2AO75445 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USH2AO75445 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC7.82□□□□□ -1.16
USH2AO75445 AC092580.3-201ENST00000430932 139 ntBASIC7.82□□□□□ -1.16
USH2AO75445 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 ARL16-210ENST00000574938 751 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 MIR6727-201ENST00000620702 65 ntBASIC7.82□□□□□ -1.16
USH2AO75445 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC7.82□□□□□ -1.16
USH2AO75445 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 MIR346-201ENST00000362234 95 ntBASIC7.82□□□□□ -1.16
USH2AO75445 MIR663B-201ENST00000408361 115 ntBASIC7.82□□□□□ -1.16
USH2AO75445 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 AC022144.1-201ENST00000602255 1580 ntBASIC7.82□□□□□ -1.16
USH2AO75445 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 AC140878.1-201ENST00000565277 250 ntBASIC7.82□□□□□ -1.16
USH2AO75445 BSG-214ENST00000614867 960 ntTSL 3 BASIC7.82□□□□□ -1.16
USH2AO75445 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms