Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 WIZP1-201ENST00000531444 2299 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CPNE3O75131 AC135050.7-201ENST00000624508 2218 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CPNE3O75131 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 MRPL3P1-201ENST00000400109 1033 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 AC132008.2-207ENST00000454517 770 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.03■□□□□ 0.32
CPNE3O75131 AC079776.4-201ENST00000511039 504 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE3O75131 AC008608.2-201ENST00000606089 416 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 AC125634.1-201ENST00000438758 1403 ntBASIC17.03■□□□□ 0.32
CPNE3O75131 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CPNE3O75131 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE3O75131 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CPNE3O75131 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CPNE3O75131 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CPNE3O75131 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.02■□□□□ 0.32
CPNE3O75131 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.02■□□□□ 0.32
CPNE3O75131 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 AC112698.1-201ENST00000510299 916 ntBASIC17.02■□□□□ 0.32
CPNE3O75131 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE3O75131 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.02■□□□□ 0.32
CPNE3O75131 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.02■□□□□ 0.32
CPNE3O75131 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE3O75131 TP73-AS1-207ENST00000624167 988 ntBASIC17.02■□□□□ 0.32
CPNE3O75131 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CPNE3O75131 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
CPNE3O75131 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.02■□□□□ 0.31
CPNE3O75131 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE3O75131 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CPNE3O75131 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CPNE3O75131 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CPNE3O75131 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE3O75131 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE3O75131 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CPNE3O75131 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPNE3O75131 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.01■□□□□ 0.31
CPNE3O75131 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 RBM17P3-201ENST00000417687 1192 ntBASIC17.01■□□□□ 0.31
CPNE3O75131 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE3O75131 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CPNE3O75131 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE3O75131 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE3O75131 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 AC011467.2-201ENST00000598425 242 ntBASIC17.01■□□□□ 0.31
CPNE3O75131 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
CPNE3O75131 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE3O75131 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17■□□□□ 0.31
CPNE3O75131 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17■□□□□ 0.31
CPNE3O75131 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17■□□□□ 0.31
CPNE3O75131 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17■□□□□ 0.31
CPNE3O75131 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CPNE3O75131 ESPNP-201ENST00000270691 2015 ntBASIC17■□□□□ 0.31
CPNE3O75131 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE3O75131 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms