Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.53■□□□□ 0.56
OPHN1O60890 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
OPHN1O60890 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.53■□□□□ 0.56
OPHN1O60890 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
OPHN1O60890 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 AL121772.3-201ENST00000610840 674 ntBASIC18.53■□□□□ 0.56
OPHN1O60890 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.53■□□□□ 0.56
OPHN1O60890 AL157888.1-201ENST00000631930 593 ntBASIC18.53■□□□□ 0.56
OPHN1O60890 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 KRT18P55-202ENST00000578578 1546 ntBASIC18.53■□□□□ 0.56
OPHN1O60890 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPHN1O60890 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
OPHN1O60890 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
OPHN1O60890 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.52■□□□□ 0.56
OPHN1O60890 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
OPHN1O60890 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 AL022342.1-201ENST00000400363 863 ntBASIC18.52■□□□□ 0.56
OPHN1O60890 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 EMBP1-201ENST00000458200 901 ntBASIC18.52■□□□□ 0.56
OPHN1O60890 AC009078.2-202ENST00000463353 338 ntBASIC18.52■□□□□ 0.56
OPHN1O60890 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.52■□□□□ 0.56
OPHN1O60890 DUTP2-201ENST00000519164 463 ntBASIC18.52■□□□□ 0.56
OPHN1O60890 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 AC023511.2-201ENST00000618803 211 ntBASIC18.52■□□□□ 0.56
OPHN1O60890 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
OPHN1O60890 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPHN1O60890 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
OPHN1O60890 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
OPHN1O60890 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPHN1O60890 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPHN1O60890 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPHN1O60890 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPHN1O60890 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.52■□□□□ 0.55
OPHN1O60890 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.51■□□□□ 0.55
OPHN1O60890 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
OPHN1O60890 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.51■□□□□ 0.55
OPHN1O60890 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
OPHN1O60890 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 AC091304.2-201ENST00000564639 760 ntBASIC18.51■□□□□ 0.55
OPHN1O60890 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.51■□□□□ 0.55
OPHN1O60890 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.51■□□□□ 0.55
OPHN1O60890 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
OPHN1O60890 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.51■□□□□ 0.55
OPHN1O60890 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPHN1O60890 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
OPHN1O60890 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPHN1O60890 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms